Nicolae Sapoval

Wir müssen wissen – wir werden wissen (David Hilbert)

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Duncan Hall

6100 Main Street

Houston, TX 77005

I am currently a postdoctoral researcher at Rice University in Dr. Luay Nakhleh’s group. My research interests lie at the intersection of computer science, mathematics, and biology. I have received my Ph.D. in Computer Science from Rice University under the guidance of Dr. Todd J. Treangen. I have previously completed a B.Sc. with Honors in Mathematics, and a B.Sc. in Computer Science at the University of Chicago.

news

Oct 30, 2026 “Advancing microbial pangenomics through human pangenomics” is out in Trends in Genetics
Oct 18, 2026 “DIMPLE: A Tree-Guided Divide-and-Conquer Framework for ILS-Aware Phylogenetic Network Inference on Large-Scale Data” is available on bioRxiv
Jun 26, 2026 “Kente: A Graph-based Pangenomic Approach for Horizontal Gene Transfer Detection in Microbiomes” is available on bioRxiv
May 26, 2026 “On the consistency of duplication, loss, and deep coalescence gene tree parsimony costs under the multispecies coalescent” is out in the proceedings of RECOMB-CG Springer
May 26, 2026 “Theoretical and Empirical Performance of Pseudo-likelihood-based Bayesian Inference of Species Trees under the Multispecies Coalescent” is out in the proceedings of RECOMB-CG Springer
Apr 30, 2026 “Impact of Data Error on Phylogenetic Network Inference from Gene Trees Under the Multispecies Network Coalescent” is out in Methods in Molecular Biology Springer
Mar 12, 2026 “Leveraging spectrum of graph sheaf Laplacian as a genome-architecture-aware measure of microbiome diversity” is available on bioRxiv
Feb 21, 2026 “On the consistency of duplication, loss, and deep coalescence gene tree parsimony costs under the multispecies coalescent” is available on bioRxiv
Nov 28, 2025 “GRNITE: Gene Regulatory Network Inference with Text Embeddings” is available on bioRxiv
Jun 16, 2025 “A survey of computational approaches for characterizing microbial interactions in microbial mats” is out in Genome Biology